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| == Ontology and Imaging Informatics ==
| | See: [[Ontology and Imaging Informatics]] |
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| *Venue: [http://www.ramadahotelamherst.com/ Ramada Inn Hotel and Conference Center, Amherst, NY 14068]
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| *Dates
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| :*Tutorial: June 23, 2014
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| :*Workshop: June 24-25, 2014
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| *Goals: The goal of this meeting is to identify ways to advance interoperability of biomedical imaging data across the CTSA Consortium and beyond. Examples of the types of subtopics to be addressed include:
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| ::LIMS interoperability
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| ::Immunohistochemistry Imaging
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| ::Standards for biomedical video data
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| ::[http://www.openmicroscopy.org/ The Open Microscopy Environment] (OME)
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| ::[[Gamuts | The Radiology Gamuts Ontology]]
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| ::[http://www.aperio.com/healthcare/eslide Aperio ePathology]
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| ::[http://obi-ontology.org/page/Main_Page Ontology for Biomedical Investigations] (OBI)
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| *Space for this meeting is limited and intending participants are encouraged to write to [mailto:phismith@buffalo.edu Barry Smith] as soon as possible.
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| == '''Draft Schedule: Tutorial''' ==
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| <u>Monday, June 23</u>
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| '''Tutorial'''
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| 10:00 Registration
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| 10:30 [http://www.ccmb.med.umich.edu/node/192 Ulysses Balis] (Michigan): Introduction to Imaging Informatics: The Problem of Image Data Interoperability
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| 12:30 Lunch
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| 13:30 [http://ontology.buffalo.edu/smith Barry Smith] (Buffalo): Introduction to Ontology for Imaging Informatics
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| 15:00 Break
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| 15:30 [http://dbmi.uams.edu/faculty/william-r-hogan-m-d/ William Hogan] (Arkansas): Ontology in the CTSA Consortium
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| == '''Draft Schedule: Workshop''' ==
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| <u>Tuesday, June 24</u>
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| :8:30 Breakfast and Registration
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| :9:15 Participant Introductions
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| :9:30 Keynote Address: [http://www.stanford.edu/~rubin/ '''Daniel Rubin] (Stanford University): Imaging Big Data'''
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| ::Driving use cases for imaging in the era of Big Data
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| ::The central role of imaging ontology
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| ::Example projects using ontologies
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| :10:30 Break
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| :11:00 Digital Pathology across the CTSA Consortium: Identifying what there is
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| :12:30 Lunch
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| :13:30 '''[http://www.dbmi.pitt.edu/person/michael-j-becich-md-phd Michael J. Becich]: An Overview of Standards and Initiatives in Digital Pathology'''
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| :14:30 '''[http://www.mcw.edu/radiology/faculty/CharlesKahn.htm Charles Kahn]: Radiology Gamuts Ontology: Differential Diagnosis in Radiology'''
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| :15:30 Break
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| :16:00 '''[http://medicine.osu.edu/bmi/people/metin_gurcan/pages/index.aspx Metin N. Gurcan], [http://engineering.case.edu/centers/ccipd/ Anant Madabhushi] and [http://medicine.buffalo.edu/faculty/profile.html?ubit=johntoma John Tomaszewski]: Histopathological Image Analysis (HIMA) and Ontology'''
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| <u>Wednesday, June 25</u>
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| :8:30 Breakfast
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| :9:00 Digital Pathology: Practical sessions devoted to creating a strategy to promote interoperability of digital pathology data and systems
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| :12:00 Lunch
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| :13:00 Group Meetings
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| ::Hackathon: Building an Ontology for Digital Pathology
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| ::CTS Ontology Affinity Group
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| :Other breakout sessions will be organized according to demand
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| 16:00 Close
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| ----
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| == Sponsors ==
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| *[http://www.smbs.buffalo.edu/path/index.htm Department of Pathology and Anatomy], School of Medicine and Biomedical Sciences, University at Buffalo
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| *[http://bioontologies.org National Center for Biomedical Ontology]
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| *[https://www.ctsacentral.org/committee/ikfc-clinical-and-translational-science-affinity-group-ctso-ag IKFC Clinical and Translational Science Ontology Affinity Group].
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| ----
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| == Organizing Committee ==
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| :Barry Smith (Buffalo)
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| :William Hogan (Arkansas)
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| :John Tomaszewski (Buffalo)
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| == Initial List of Participants ==
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| Ulysses J. Balis (Ann Arbor)
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| Michael Becich (Pittsburgh)
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| Michael Dwyer (Buffalo)
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| Metin Gurcan (Ohio)
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| William Hogan (Arkansas)
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| Charles E. Kahn (Milwaukee)
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| Anant Madabhushi (Case)
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| Anna Maria Masci (Duke)
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| Daniel Rubin (Stanford)
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| Barry Smith (Buffalo)
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| Jose Luis Tapia (Buffalo)
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| John Tomaszewski (Buffalo)
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