BFO-Based Data and Information Ontologies: Difference between revisions
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(Created page with "'''Articles''' :Mary Bone, Mark Blackburn, Benjamin Kruse, John Dzielski, Thomas Hagedorn and Ian Grosse, "[https://www.mdpi.com/2079-8954/6/4/46 Toward an Interoperability a...") |
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:Hyunmin Cheong, Adrian Butscher, [https://www.tandfonline.com/doi/full/10.1080/09544828.2019.1644301 Physics-based simulation ontology: an ontology to support modelling and reuse of data for physics-based simulation], ''Journal of Engineering Design'', 23 July 2019. | :Hyunmin Cheong, Adrian Butscher, [https://www.tandfonline.com/doi/full/10.1080/09544828.2019.1644301 Physics-based simulation ontology: an ontology to support modelling and reuse of data for physics-based simulation], ''Journal of Engineering Design'', 23 July 2019. | ||
'''Ontologies''' | |||
:[http://obofoundry.org/ontology/iao.html Information Artifact Ontology (IAO)] | |||
:[https://pdfs.semanticscholar.org/f424/b88d92bcc00ade3d61acede2ee8732301350.pdf Ceusters W. An information artifact ontology perspective on data collections and associated representational artifacts. Stud Health Technol Inform. 2012;180:68–72.] | |||
:[https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5209884/ Barton, Adrien et al. “An ontological analysis of medical Bayesian indicators of performance.” Journal of biomedical semantics vol. 8,1 1. 3 Jan. 2017, doi:10.1186/s13326-016-0099-4] | |||
:[http://obofoundry.org/ontology/cheminf.html Chemical Information Ontology (CHEMINF)] | |||
:[https://www-spiedigitallibrary-org.gate.lib.buffalo.edu/conference-proceedings-of-spie/10635/106350F/A-common-core-based-cyber-ontology-in-support-of-cross/10.1117/12.2307719.full?SSO=1 Common Core Cyber Ontology (C3O)] | |||
:[http://www.ncbi.nlm.nih.gov/pubmed/20543345 Communication Standards Ontology (CSO)] | |||
:[https://bioportal.bioontology.org/ontologies/CDAO Comparative Data Analysis Ontology (CDAO)] | |||
:[http://ceur-ws.org/Vol-833/paper25.pdf Conceptual Model Ontology (CMO)] | |||
:[https://www.researchgate.net/publication/263323866_Clinical_Data_Integration_Model_Core_Interoperability_Ontology_for_Research_Using_Primary_Care_Data Core Data Integration Model (CDIM)] | |||
:[https://doi.org/10.3390/systems6040046 Decision Ontology] | |||
:[https://code.google.com/p/d-acts Document Act Ontology (D-Acts)] | |||
:[http://ncor.buffalo.edu/2013/STIDS/5-Email.pptx Email Ontology] | |||
:[https://lirias.kuleuven.be/bitstream/123456789/273222/1/sokd10.pdf Exposé: an ontology for data mining experiments] (see also :[https://www.researchgate.net/publication/228525536_Expose_An_ontology_for_data_mining_experiments here]) | |||
:[https://arxiv.org/ftp/arxiv/papers/1805/1805.11050.pdf eXtended Formal Ontology (XFO)] | |||
:[http://jamia.bmj.com/content/20/5/986.full General Information Model (GIM)] | |||
:[https://ieeexplore.ieee.org/abstract/document/8795392 Information Security Domain (ISD) ontology] | |||
:[http://ceur-ws.org/Vol-2285/ICBO_2018_paper_59.pdf Informed Consent Ontology (ICO)] | |||
:[https://onlinelibrary.wiley.com/doi/full/10.1002/lrh2.10054 Knowledge Object Reference Ontology (KORO)] | |||
:[http://obofoundry.org/ontology/mf.html Mental Functioning Ontology (MF)] | |||
:[http://obofoundry.org/ontology/obi.html Ontology for Biomedical Investigations (OBI)] | |||
:[http://ceur-ws.org/Vol-2427/SEPDA_2019_paper_15.pdf Ontology for Documentation of Variable/Data Source Selection (ODVDS)] | |||
:[http://www.ontodm.com/ Ontology of Data Mining (OntoDM)] | |||
:[http://www.ontodt.com/ Ontology of Datatypes (OntoDT)] (see also :[http://www.sciencedirect.com/science/article/pii/S0020025515005800 here]) | |||
:[https://bioportal.bioontology.org/ontologies/OOEVV Ontology of Experimental Variables and Values (OOEVV)] (with hooks to OBI) (see also :[https://www.isi.edu/projects/kefed_ooevv/kefed_ooevv_technology here]) | |||
:[https://www.researchgate.net/publication/299534658_OntoforInfoScience_a_detailed_methodology_for_construction_of_ontologies_and_its_application_in_the_blood_domain Ontology for Information Science (OntoforInforScience)] | |||
:[http://www.sciencedirect.com.gate.lib.buffalo.edu/science/article/pii/S1570826815000165 Ontology-Based Data Access (OBDA)] | |||
:[http://www.ncbi.nlm.nih.gov/pubmed/20460173 Ontology-Based eXtensible Data Model (OBX)] | |||
:[http://www.sciencedirect.com/science/article/pii/S0952197615000913 Ontology-Driven Information System (ODIS) / Ontology-Driven Scenario Generator (ODSG)] | |||
:[https://code.google.com/p/proper-name-ontology Proper Name Ontology (PNO)] | |||
:[http://cci.case.edu/cci/images/a/aa/Janus.pdf Provenir ontology for provenance modeling] | |||
:[http://ceur-ws.org/Vol-1747/IT605_ICBO2016.pdf Scientific Evidence and Provenance Information Ontology (SEPIO)] | |||
:[http://code.google.com/p/semanticscience/wiki/SIO Semanticscience Integrated Ontology (SIO)] | |||
:[http://ieeexplore.ieee.org/document/8232468/ Sentinel: Platform for Semantic Enrichment of Social Media Streams] | |||
:[http://link.springer.com/article/10.1007/s10489-016-0834-7 Situation Awareness Ontology (SAO)] | |||
:[https://www.tandfonline.com/doi/abs/10.1080/13658816.2017.1309043?journalCode=tgis20 Sketch Map Ontology] | |||
:[http://jbiomedsem.biomedcentral.com/articles/10.1186/2041-1480-5-25 Software Ontology (SWO)] | |||
:[http://obofoundry.org/ontology/stato.html Statistics Ontology (STATO)] | |||
:[https://www.scitepress.org/papers/2017/65827/65827.pdf Survey Ontology] | |||
:[https://unsceb-hlcm.github.io/onto-undo/ United Nations System Document Ontology (ONTO-UNDO)] | |||
:[https://openreview.net/forum?id=SkgyVa-coV VIVO Ontology] | |||
Revision as of 15:48, 5 April 2020
Articles
- Mary Bone, Mark Blackburn, Benjamin Kruse, John Dzielski, Thomas Hagedorn and Ian Grosse, "Toward an Interoperability and Integration Framework to Enable Digital Thread", Systems, 2018, 6(4), 46; https://doi.org/10.3390/systems6040046.
- Hyunmin Cheong, Adrian Butscher, Physics-based simulation ontology: an ontology to support modelling and reuse of data for physics-based simulation, Journal of Engineering Design, 23 July 2019.
Ontologies
- Information Artifact Ontology (IAO)
- Ceusters W. An information artifact ontology perspective on data collections and associated representational artifacts. Stud Health Technol Inform. 2012;180:68–72.
- Barton, Adrien et al. “An ontological analysis of medical Bayesian indicators of performance.” Journal of biomedical semantics vol. 8,1 1. 3 Jan. 2017, doi:10.1186/s13326-016-0099-4
- Chemical Information Ontology (CHEMINF)
- Common Core Cyber Ontology (C3O)
- Communication Standards Ontology (CSO)
- Comparative Data Analysis Ontology (CDAO)
- Conceptual Model Ontology (CMO)
- Core Data Integration Model (CDIM)
- Decision Ontology
- Document Act Ontology (D-Acts)
- Email Ontology
- Exposé: an ontology for data mining experiments (see also :here)
- eXtended Formal Ontology (XFO)
- General Information Model (GIM)
- Information Security Domain (ISD) ontology
- Informed Consent Ontology (ICO)
- Knowledge Object Reference Ontology (KORO)
- Mental Functioning Ontology (MF)
- Ontology for Biomedical Investigations (OBI)
- Ontology for Documentation of Variable/Data Source Selection (ODVDS)
- Ontology of Data Mining (OntoDM)
- Ontology of Datatypes (OntoDT) (see also :here)
- Ontology of Experimental Variables and Values (OOEVV) (with hooks to OBI) (see also :here)
- Ontology for Information Science (OntoforInforScience)
- Ontology-Based Data Access (OBDA)
- Ontology-Based eXtensible Data Model (OBX)
- Ontology-Driven Information System (ODIS) / Ontology-Driven Scenario Generator (ODSG)
- Proper Name Ontology (PNO)
- Provenir ontology for provenance modeling
- Scientific Evidence and Provenance Information Ontology (SEPIO)
- Semanticscience Integrated Ontology (SIO)
- Sentinel: Platform for Semantic Enrichment of Social Media Streams
- Situation Awareness Ontology (SAO)
- Sketch Map Ontology
- Software Ontology (SWO)
- Statistics Ontology (STATO)
- Survey Ontology
- United Nations System Document Ontology (ONTO-UNDO)
- VIVO Ontology
