The Role of Ontology in Big Cancer Data: Difference between revisions
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*Ilya Goldberg (Image Informatics and Computational Biology Unit, National Institute on Aging) | *Ilya Goldberg (Image Informatics and Computational Biology Unit, National Institute on Aging) | ||
*Warren Kibbe (National Cancer Institute / Disease Ontology) | *Warren Kibbe (National Cancer Institute / Disease Ontology) | ||
*Raja Mazumder (Georgetown University / Protein Information Resource) | |||
*Elvira Mitraka (University of Maryland, Baltimore) | |||
*Mark Musen (Stanford / National Center for Biomedical Ontology and Center for Expanded Data Annotation and Retrieval) | *Mark Musen (Stanford / National Center for Biomedical Ontology and Center for Expanded Data Annotation and Retrieval) | ||
*Darren Natale (Georgetown University / Protein Ontology Consortium) | *Darren Natale (Georgetown University / Protein Ontology Consortium) | ||
*Lynn Schriml (Baltimore / Disease Ontology) | *Lynn Schriml (University of Maryland, Baltimore / Disease Ontology) | ||
*Barry Smith (Buffalo / Open Biomedical Ontologies Foundry) | *Barry Smith (Buffalo / Open Biomedical Ontologies Foundry) | ||
*John Tomaszewski (Buffalo) | *John Tomaszewski (Buffalo) | ||
Revision as of 22:07, 13 November 2014
Date: May 12-13, 2015
Venue
- Day 1 (10am-5pm) and Day 2 (9am-noon) will be in NCI's Shady Grove building (9609 Medical Center Dr, Rockville, MD, 20850), in Room 2W-32/34.
- Day 2 Afternoon (1-3pm) will be a public session in the Natcher Conference Center, NIH Building 45, Bethesda, MD 20892
Goal of the meeting (to be expanded)
To explore the utility of ontologies for big data-based cancer research
Areas of interest
- TCGA (e.g. How to expand TCGA to give an enhanced role to proteomics)
- Ontology work (for example using the PRO) on actionable mutations
- Applications to personalized medicine
- IoM new disease taxonomy
- Big Cancer Imaging Data
- Clinical genomics
Sponsors
- National Cancer Institute Center for Biomedical Informatics and Information Technology (CBIIT)
- National Center for Biomedical Ontology (NCBO)
- National Center for Ontological Research (NCOR)
- Center for Expanded Data Annotation and Retrieval ([CEDAR)
Participants will include
- Sherri de Coronado (National Cancer Institute)
- Lindsay Cowell (UT Southwestern Medical Center)
- Peter Elkin (Department of Biomedical Informatics, University at Buffalo)
- Gilberto Fragoso (National Cancer Institute)
- Ilya Goldberg (Image Informatics and Computational Biology Unit, National Institute on Aging)
- Warren Kibbe (National Cancer Institute / Disease Ontology)
- Raja Mazumder (Georgetown University / Protein Information Resource)
- Elvira Mitraka (University of Maryland, Baltimore)
- Mark Musen (Stanford / National Center for Biomedical Ontology and Center for Expanded Data Annotation and Retrieval)
- Darren Natale (Georgetown University / Protein Ontology Consortium)
- Lynn Schriml (University of Maryland, Baltimore / Disease Ontology)
- Barry Smith (Buffalo / Open Biomedical Ontologies Foundry)
- John Tomaszewski (Buffalo)
- Cathy Wu (Delaware / Protein Ontology)
- Wenjin J. Zheng (Center for Computational Biomedicine, University of Texas Health Science Center at Houston)
