Intelligence Analysis: A Philosophical Introduction: Difference between revisions
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Intelligence Analysis: A Philosophical Introduction | Intelligence Analysis: A Philosophical Introduction | ||
Special Topic PHI 589 | |||
'''Registration''': | '''Registration''': | ||
:Class#: [http://www.buffalo.edu/class-schedule?switch=showclass&semester=spring&division=GRAD&dept=PHI®num=XXXXX XXXXX] (PHI) | :Class#: [http://www.buffalo.edu/class-schedule?switch=showclass&semester=spring&division=GRAD&dept=PHI®num=XXXXX XXXXX] (PHI) | ||
'''Instructors'': [http://ontology.buffalo.edu/smith/shortcv.htm Barry Smith], [http://davidglimbaugh.com/ David Limbaugh] | '''Instructors''': [http://ontology.buffalo.edu/smith/shortcv.htm Barry Smith], [http://davidglimbaugh.com/ David Limbaugh] | ||
'''Prerequisites''': Open to all persons with an undergraduate degree. | '''Prerequisites''': Open to all persons with an undergraduate degree. | ||
'''Office hours''': By appointment via email at [mailto:phismith@buffalo.edu phismith@buffalo.edu] | '''Office hours''': By appointment via email at [mailto:phismith@buffalo.edu phismith@buffalo.edu] or [mailto:dglimbau@buffalo.edu dglimbau@buffalo.edu] | ||
== '''The Course''' == | == '''The Course''' == | ||
'''Course Description:''' The aim of the course is to provide | '''Course Description:''' The aim of the course is to provide a philosophical introduction to intelligence analysis. This will involve applying the methods of philosophy to a range of topics including: the cognitive processes involved in intelligence analyst, the different types of evidence, the goals of intelligence analysis, statistical aspects of analytic reasoning, analytic reasong and deep learning. Philosophical methods employed will include those of epistemology, social ontology, cognitive ontology, and the philosophy of computing and information. | ||
'''Course Structure:''' This will be a three credit hour graduate seminar. | '''Course Structure:''' This will be a three credit hour graduate seminar. Components of each three-hour seminar will be incorporated into a series of on-line videos. The final session will be structured around youtube videos created by the students in the class. | ||
''' | '''Background Reading:''' Robert Arp, Barry Smith and Andrew Spear, [https://mitpress.mit.edu/index.php?q=books/building-ontologies-basic-formal-ontology Building Ontologies with Basic Formal Ontology], Cambridge, MA: MIT Press, August 2015. | ||
: | |||
[https:// | Jobst Landgrebe and Barry Smith, "[https://arxiv.org/pdf/1901.02918.pdf Making AI Meaningful Again]", ''arXiv'', 2019. | ||
'''Intelligence Analysis in Buffalo''': UB scientists are involved in a variety of projects in which intelligence analysis plays a role. | |||
'''Schedule:''' | |||
==August 26: Introduction to Intelligence Analysis== | |||
==September 2: Labor Day – No class== | |||
==September | ==September 9 Basic Formal Ontology== | ||
==September | ==September 16: Ontology and Information Engineering in the Healthcare Domain== | ||
:Ontology look-alikes | :Ontology look-alikes | ||
| Line 53: | Line 42: | ||
Advance reading (prior to October 1 lecture): [https://www.hindawi.com/journals/bmri/2014/134023/ Merelli, ''et al'', 2014] | Advance reading (prior to October 1 lecture): [https://www.hindawi.com/journals/bmri/2014/134023/ Merelli, ''et al'', 2014] | ||
==September | ==September 23: Ontology of Disease== | ||
:Disease from the clinician’s perspective, | :Disease from the clinician’s perspective, | ||
| Line 65: | Line 54: | ||
Advance reading (prior to September 17 lecture): Chapters 5 and 6 of Arp, Smith and Spear, 2016 | Advance reading (prior to September 17 lecture): Chapters 5 and 6 of Arp, Smith and Spear, 2016 | ||
== | ==September 30: Disease / Aging / Ontology Building == | ||
Ontology of Disease (Continued) | Ontology of Disease (Continued) | ||
| Line 85: | Line 74: | ||
:[https://philpapers.org/rec/SCHTAO-29 Toward an Ontological Treatment of Disease and Diagnosis] | :[https://philpapers.org/rec/SCHTAO-29 Toward an Ontological Treatment of Disease and Diagnosis] | ||
==October | ==October 7: Introduction to Protégé == | ||
[https://protege.stanford.edu/ Protégé] is the leading open-source ontology editor | [https://protege.stanford.edu/ Protégé] is the leading open-source ontology editor | ||
| Line 96: | Line 85: | ||
Fourth class assignment: Create a simple ontology using Protégé. Deadline: noon, 25 October. | Fourth class assignment: Create a simple ontology using Protégé. Deadline: noon, 25 October. | ||
==October | ==October 14: Pain / Bruxism / Embryontology == | ||
Ontology of Pain | Ontology of Pain | ||
| Line 118: | Line 107: | ||
Fifth class assignment: Create a plan for your presentation on December 3 | Fifth class assignment: Create a plan for your presentation on December 3 | ||
==October | ==October 21: Joint Doctrine Ontology / Building an Ethical Warfighter / Terrorism== | ||
Joint Doctrine Ontology (JDO) | Joint Doctrine Ontology (JDO) | ||
| Line 137: | Line 126: | ||
:[https://www.researchgate.net/publication/328145335_From_Affective_Science_to_Psychiatric_Disorder_Ontology_as_a_Semantic_Bridge R. R. Larsen and J. Hastings, "From Affective Science to Psychiatric Disorder: Ontology as a Semantic Bridge" (2018)] | :[https://www.researchgate.net/publication/328145335_From_Affective_Science_to_Psychiatric_Disorder_Ontology_as_a_Semantic_Bridge R. R. Larsen and J. Hastings, "From Affective Science to Psychiatric Disorder: Ontology as a Semantic Bridge" (2018)] | ||
==October | ==October 28: Top-Level Ontologies / The Six-Category Ontology / Truth and Maps== | ||
Top-Level Ontologies | Top-Level Ontologies | ||
| Line 156: | Line 145: | ||
:http://ncorwiki.buffalo.edu/index.php/Basic_Formal_Ontology_2.0 Basic Formal Ontology] | :http://ncorwiki.buffalo.edu/index.php/Basic_Formal_Ontology_2.0 Basic Formal Ontology] | ||
==November | ==November 4: From Speech Acts to Document Acts / Social Agency / Deontics == | ||
From speech acts to document acts | From speech acts to document acts | ||
| Line 170: | Line 159: | ||
[https://buffalo.box.com/s/xrpf0b84619qcxuvcdi08ri3ufhh9zp1 Slides] [https://www.youtube.com/watch?v=g7vplac5JP0 Video] | [https://buffalo.box.com/s/xrpf0b84619qcxuvcdi08ri3ufhh9zp1 Slides] [https://www.youtube.com/watch?v=g7vplac5JP0 Video] | ||
==November | ==November 11: Artificial Intelligence, Deep Learning, Machine Learning / Money == | ||
:Overview of machine learning and other approaches to the exploitation of Big Data (presented by [https://krkeane.github.io/about/ Kevin Keane]) | :Overview of machine learning and other approaches to the exploitation of Big Data (presented by [https://krkeane.github.io/about/ Kevin Keane]) | ||
| Line 186: | Line 175: | ||
:[http://arxiv.org/abs/1801.00631 G. Marcus (2018), "Deep Learning: A Critical Appraisal"] | :[http://arxiv.org/abs/1801.00631 G. Marcus (2018), "Deep Learning: A Critical Appraisal"] | ||
==November | ==November 18: The Ontology of the Eruv == | ||
The Ontology of the Eruv | The Ontology of the Eruv | ||
| Line 198: | Line 187: | ||
:[https://philpapers.org/archive/SMIOPA-3.pdf The Ontology of the Eruv] | :[https://philpapers.org/archive/SMIOPA-3.pdf The Ontology of the Eruv] | ||
==November | ==November 25: Why computer science needs philosophy / Why I am not a Philosopher == | ||
Why computer science needs philosophy | Why computer science needs philosophy | ||
| Line 208: | Line 197: | ||
[https://buffalo.box.com/s/y74umhxrfod6jr5zhh9g659pgea2weld Slides] [https://youtu.be/e5zjZnbi-ZA Video] | [https://buffalo.box.com/s/y74umhxrfod6jr5zhh9g659pgea2weld Slides] [https://youtu.be/e5zjZnbi-ZA Video] | ||
==December | ==December 2: Student Projects == | ||
Revision as of 17:12, 24 February 2019
Intelligence Analysis: A Philosophical Introduction Special Topic PHI 589
Registration:
- Class#: XXXXX (PHI)
Instructors: Barry Smith, David Limbaugh
Prerequisites: Open to all persons with an undergraduate degree.
Office hours: By appointment via email at phismith@buffalo.edu or dglimbau@buffalo.edu
The Course
Course Description: The aim of the course is to provide a philosophical introduction to intelligence analysis. This will involve applying the methods of philosophy to a range of topics including: the cognitive processes involved in intelligence analyst, the different types of evidence, the goals of intelligence analysis, statistical aspects of analytic reasoning, analytic reasong and deep learning. Philosophical methods employed will include those of epistemology, social ontology, cognitive ontology, and the philosophy of computing and information.
Course Structure: This will be a three credit hour graduate seminar. Components of each three-hour seminar will be incorporated into a series of on-line videos. The final session will be structured around youtube videos created by the students in the class.
Background Reading: Robert Arp, Barry Smith and Andrew Spear, Building Ontologies with Basic Formal Ontology, Cambridge, MA: MIT Press, August 2015.
Jobst Landgrebe and Barry Smith, "Making AI Meaningful Again", arXiv, 2019.
Intelligence Analysis in Buffalo: UB scientists are involved in a variety of projects in which intelligence analysis plays a role.
Schedule:
August 26: Introduction to Intelligence Analysis
September 2: Labor Day – No class
September 9 Basic Formal Ontology
September 16: Ontology and Information Engineering in the Healthcare Domain
- Ontology look-alikes
- Use of ontology and look-alikes in biomedical applications
- BFO as benchmark for biomedical Information Engineering (IE)
Second class assignment: Summarize in a 2-page essay the problems discussed in (SW Smith and Koppel, 2014) and describe how Basic Formal Ontology can assist in dealing solving them
Advance reading (prior to October 1 lecture): Merelli, et al, 2014
September 23: Ontology of Disease
- Disease from the clinician’s perspective,
- Ontological approaches to disease,
- The Ontology for General Medical Science
Third class assignment: Summarize in a 2-page essay the issues discussed in pages 16-21 of Haendel et. al., 2018 and describe how the framework offered by Scheuermann, Ceusters and Smith, 2009 might resolve them.
Advance reading (prior to September 17 lecture): Chapters 5 and 6 of Arp, Smith and Spear, 2016
September 30: Disease / Aging / Ontology Building
Ontology of Disease (Continued)
Ontology of Aging
Ontology Building
Reading:
October 7: Introduction to Protégé
Protégé is the leading open-source ontology editor
This class taught by Brian Donohue
Fourth class assignment: Create a simple ontology using Protégé. Deadline: noon, 25 October.
October 14: Pain / Bruxism / Embryontology
Ontology of Pain
Bruxism
Embryontology
Readings:
Fifth class assignment: Create a plan for your presentation on December 3
October 21: Joint Doctrine Ontology / Building an Ethical Warfighter / Terrorism
Joint Doctrine Ontology (JDO)
Building an Ethical Warfighter
Ontology of Terrorism
Readings:
- Department of Defense Dictionary of Military and Associated Terms
- P. Morossof et al., "Joint Doctrine Ontology: A Benchmark for Military Information Systems Interoperability" (2015)
- R. R. Larsen and J. Hastings, "From Affective Science to Psychiatric Disorder: Ontology as a Semantic Bridge" (2018)
October 28: Top-Level Ontologies / The Six-Category Ontology / Truth and Maps
Top-Level Ontologies
The Six-Category Ontology
Truth and the Ontology of Maps
Readings:
- DOLCE: An Upper-Level Ontology
- SUMO Suggested Upper Merged Ontology
- http://ncorwiki.buffalo.edu/index.php/Basic_Formal_Ontology_2.0 Basic Formal Ontology]
November 4: From Speech Acts to Document Acts / Social Agency / Deontics
From speech acts to document acts
Massively planned social agency
Deontic entities
November 11: Artificial Intelligence, Deep Learning, Machine Learning / Money
- Overview of machine learning and other approaches to the exploitation of Big Data (presented by Kevin Keane)
- Role of ontology in Data Science
- Ontology of money
Readings:
November 18: The Ontology of the Eruv
The Ontology of the Eruv
Reading:
November 25: Why computer science needs philosophy / Why I am not a Philosopher
Why computer science needs philosophy
Why I am not a philosopher
December 2: Student Projects
Provisional list of topics
- Ontology, AI and Robotics
- Services, Commodities, Infrastructure
- Product Life Cycle Ontology
- Ontology and Information Engineering in the Healthcare Domain
- The Science of Document Informatics
- Finance Ontology
- The Ontology of Plans
- Ontology of Military Logistics
- Ontology and Intelligence Analysis
- Ontology and Data Fusion
- Ontology of Terrorism
Student Learning Outcomes
| Program Outcomes/Competencies | Instructional Method(s) | Assessment Method(s) |
|---|---|---|
| The student will acquire a thorough knowledge of current ontology research in areas relating to engineering, data fusion, defense and intelligence | Video lectures and online discussions | Review of submitted online content and of participation in online discussion forum |
| The student will acquire experience in ontology development | Video lectures and critique of successive drafts | Review of results in the form of xsl spreadsheet or Protégé file |
| The student will acquire experience in communicating the results of work on ontology development | Creation of youtube presentation and of associated documentation | Review of results |
Important dates
| Jan 28 | - first video released by Dr Smith at 9am |
| Feb 20 | - about now start to discuss by email the content of your video and essay with Dr Smith |
| Feb 28 | - submit a proposed title and abstract |
| Mar 16 | - create a simple ontology using Protege |
| Mar 31 | - submit a table of contents and 300 word summary plus draft of associated ppt slides |
| Apr 27 | - submit penultimate draft of essay and powerpoint |
| May 4 | - submit final version of essay and powerpoint and upload final version of video to youtube |
Grading
Grading will be based on two factors:
I: understanding and criticism of the videos presented in classes 1-13
All students are required to ingest the content of all videos and to take an active part in on-line discussions throughout the semester.
II: preparation of a youtube video and associated documentation (including powerpoint slides and essay).
Content and structure of the essay should be discussed with Dr Smith. Where the essay takes the form of the documentation of a specific ontology developed by the student it should include:
- Statement of scope of the ontology
- Summary of existing ontologies in the relevant domain
- Explanation of how your ontology differs from (or incorporates) these ontologies
- Screenshots of parts of the ontology with some examples of important terms and definitions
- Summaries of potential applications of the ontology
Grading Policy: Grading follows standard Graduate School policies. Grades will be weighted according to the following breakdown:
Weighting Assignment
- 26% - video summaries (2% per summary)
- 14% - forum participation
- 20% - youtube video
- 20% - powerpoint slides
- 20% - essay / ontology content
Final Grades
Grade Quality Percentage
| A | 4.0 | 93.0% -100.00% |
| A- | 3.67 | 90.0% - 92.9% |
| B+ | 3.33 | 87.0% - 89.9% |
| B | 3.00 | 83.0% - 86.9% |
| B- | 2.67 | 80.0% - 82.9% |
| C+ | 2.33 | 77.0% - 79.9% |
| C | 2.00 | 73.0% - 76.9% |
| C- | 1.67 | 70.0% - 72.9% |
| D+ | 1.33 | 67.0% - 69.9% |
| D | 1.00 | 60.0% - 66.9% |
| F | 0 | 59.9% or below |
An interim grade of Incomplete (I) may be assigned if the student has not completed all requirements for the course. An interim grade of 'I' shall not be assigned to a student who did not attend the course. The default grade accompanying an interim grade of 'I' shall be 'U' and will be displayed on the UB record as 'IU.' The default Unsatisfactory (U) grade shall become the permanent course grade of record if the 'IU' is not changed through formal notice by the instructor upon the student's completion of the course.
Assignment of an interim 'IU' is at the discretion of the instructor. A grade of 'IU' can be assigned only if successful completion of unfulfilled course requirements can result in a final grade better than the default 'U' grade. The student should have a passing average in the requirements already completed. The instructor shall provide the student specification, in writing, of the requirements to be fulfilled.
The university’s Graduate Incomplete Policy can be found here.
Related Policies and Services
Academic integrity is a fundamental university value. Through the honest completion of academic work, students sustain the integrity of the university while facilitating the university's imperative for the transmission of knowledge and culture based upon the generation of new and innovative ideas. See http://grad.buffalo.edu/Academics/Policies-Procedures/Academic-Integrity.html.
Accessibility resources: If you have any disability which requires reasonable accommodations to enable you to participate in this course, please contact the Office of Accessibility Resources in 60 Capen Hall, 645-2608 and also the instructor of this course during the first week of class. The office will provide you with information and review appropriate arrangements for reasonable accommodations, which can be found on the web here.
